Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866549.1_cds_XP_016432770.1_28983
CDS Infomation

[gene=LOC107759360] [db_xref=GeneID:107759360] [protein=protease Do-like 8, chloroplastic] [protein_id=XP_016432770.1] [location=join(157486..157685,157986..158113,158962..159044,159147..159245,159477..159543,159815..159890,160035..160101,161835..162052,162182..162249,162378..162457,162715..162801,162900..163007,163441..163569)] [gbkey=CDS]
Sequence

ATGCAAGTGATAGTATCAGCTAACCAAACAACACCTCCACTTCACCCCAACCGAAATCAA
CAACCACCCATTATCACAAACAATTCAGTGTTTTTGGGCCGTAGAGAGCTCTGCTTCGAT
AGCATTTCTTCAGCCTGCTCTGCTGATCCCTCTACTCCGCACCCCATTTCCCCTCCTCCT
TCTACCGCTTTCACTCCCAGGGGTAGTGGAGATAATGGCAGTTCTTTGGTTGAACAACTA
CGGAAAAGCTTTCCATCAGCAACGCGCAGGATGTTGTTAACAAGCTTTTTCATGTATTCA
TGTTATCATCCTTCAAGGTACTTATCAGCACTTGCTTTGGGGGATCCGTCTGTCACAGTT
GAACAAGTTACACCTTCTACTTTTCCTTCCGCAGCACTGTTCCCTTCCGAGGAAAGAGTT
GTCGAGCTCTTTGAGAAGAATACCTACTGTGTTGTCAACATATTTGATGTAACCTTGAGA
CCTACGCTTAATGTTACTGGTGCAGTCGAGATTCCTGAAGGAAATGGTTCGGGGGTGATT
TGGGACAACGAAGGCCACATTGTTACTAATTACCATGTGATTGGTAACTCCCTTTCTAGA
AACCCAAGCCGTGGGCAAGTAGTTGCACGTGTTAATATTCTCGCTGCAGAAGGGGTGCAA
AAGAATTTTGAGGGTAAATTGATTGGTGCAGACCGTGCCAAGGATCTTGCTGTATTGAAG
GTGGAAACTTCTGAAGACCTGTTGAGGCCAATTAGAGTTGGGGAATCTGCTTCTTTGAGA
GTTGGCCAGCAGTGTTTAGCCATTGGAAATCCTTTTGGGTTTGATCATACACTCACTGTT
GGGGTTATCAGTGGACTGAATCGAGATATATATAGTCAAACTGGAGTGACAATTAGCGGA
GGAATTCAAACAGACGCAGCCATCAATCCTGGGAACAGCGGAGGTCCTTTGTTAGATTCA
AAAGGAAACTTGATTGGGATTAACACGGCAATATTCACTCAGACAGGGACATCAGCAGGT
GTTGGATTTGCAATCCCTTCTTCAACTGTATTGAGAATTGTGCCCCAGTTGATCCAATCT
GGAAAAGTTGTTCGTGCTGGTTTGAATATTGAAATAGCTCCAGACCTGATTGCCAACCAA
CTTAATGTTCGAAATGGAGCTCTGATTCTGCAGGTACCTGGAAATAGTCTTGCAGCCAAA
GTTGGACTTCTTCCTACTACCAGGGGTTTTGCTGGAAATATAGTACTTGGTGATATTATT
GAAGCAGTGAATGACAAACCTGTTAGGAGCAAAGCAGATTTGTATAAAGCCCTGGACAAC
TATAACATAGGTGATGAAGTTCGGCTAAAAATTCGTAGGGGCAACGAAAACATGGAGTTG
AGCATAGCATTAGAGGAAAAAGATTCATGA

Peptide Sequence

PEP ID

XP_016432770.1
PEP Infomation

PREDICTED: protease Do-like 8, chloroplastic [Nicotiana tabacum]
Sequence

MQVIVSANQTTPPLHPNRNQQPPIITNNSVFLGRRELCFDSISSACSADPSTPHPISPPP
STAFTPRGSGDNGSSLVEQLRKSFPSATRRMLLTSFFMYSCYHPSRYLSALALGDPSVTV
EQVTPSTFPSAALFPSEERVVELFEKNTYCVVNIFDVTLRPTLNVTGAVEIPEGNGSGVI
WDNEGHIVTNYHVIGNSLSRNPSRGQVVARVNILAAEGVQKNFEGKLIGADRAKDLAVLK
VETSEDLLRPIRVGESASLRVGQQCLAIGNPFGFDHTLTVGVISGLNRDIYSQTGVTISG
GIQTDAAINPGNSGGPLLDSKGNLIGINTAIFTQTGTSAGVGFAIPSSTVLRIVPQLIQS
GKVVRAGLNIEIAPDLIANQLNVRNGALILQVPGNSLAAKVGLLPTTRGFAGNIVLGDII
EAVNDKPVRSKADLYKALDNYNIGDEVRLKIRRGNENMELSIALEEKDS

Transcript Sequence

Gene sequence data has not been registered.